PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang08g05310.5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 184aa    MW: 20673.9 Da    PI: 4.965
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang08g05310.5genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-192071156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  Vang08g05310.5 20 PSYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 71
                    57*****998.**********843...6***********************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.70E-332080No hitNo description
PfamPF008471.3E-132071IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-222179IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-322179IPR001471AP2/ERF domain
SMARTSM003802.7E-372184IPR001471AP2/ERF domain
PROSITE profilePS5103223.3012178IPR001471AP2/ERF domain
PRINTSPR003671.2E-102233IPR001471AP2/ERF domain
PRINTSPR003671.2E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
LLENEKESKG CCKKRKLENP SYRGVRMRNW GKWVSEIREP RKKSRIWLGT YPTAEMAARA  60
HDVAALAIKG HSAYLNFPEL AQELPTPAST SPKDIQAAAA KAANTPFDVN HCQSTIEDEE  120
REEEPRQTQN VSSSSSNSTN DDDTLFDLPD LFPDELCSYS SSWHLCAVGS GFRLEESLFW  180
ENY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-152278663ATERF1
3gcc_A2e-152278663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014516126.11e-116PREDICTED: ethylene-responsive transcription factor ERF034-like
SwissprotQ8LBQ79e-62ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A0S3SVN31e-138A0A0S3SVN3_PHAAN; Uncharacterized protein
STRINGGLYMA07G14560.12e-84(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-45ERF family protein